Sobic.001G466100.1

Description : Glycosyl hydrolase family 10 protein

Gene families : OG_01_0015269 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015269_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G466100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G466100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_49
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	216	520
IPR044846	GH10	PANTHER	2	572
IPR001000	GH10_dom	Pfam	229	467
IPR001000	GH10_dom	SMART	265	514
IPR001000	GH10_dom	ProSiteProfiles	222	515

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM22	131	573	2.8e-05	100	168
GH10	303	573	2.7e-58	229	490

External Links

No external refs found!