Sobic.001G469700.3

Description : Undecaprenyl pyrophosphate synthetase family protein

Gene families : OG_01_0002994 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002994_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G469700.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G469700.3
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_325
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_128

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016093	polyprenol metabolic process	None	Extended
BP	GO:0016094	polyprenol biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	ISM	GOs from InterProScan
BP	GO:0019348	dolichol metabolic process	None	Extended
BP	GO:0019408	dolichol biosynthetic process	ISM	GOs from InterProScan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904423	dehydrodolichyl diphosphate synthase complex	ISM	GOs from InterProScan
CC	GO:1990234	transferase complex	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036424	UPP_synth-like_sf	Gene3D	175	301
IPR038887	Nus1/NgBR	PANTHER	52	301
IPR036424	UPP_synth-like_sf	SUPERFAMILY	110	294

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.001G469700.3

Expression Profile

Co-expression Networks

Functional Annotation