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Description : Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Gene families : OG_01_0004692 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004692_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G474600.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G474600.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_220 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_206 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | ISM | GOs from InterProScan |
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 812 | 834 |
| IPR000048 | IQ_motif_EF-hand-BS | SMART | 835 | 857 |
| IPR002909 | IPT_dom | Pfam | 406 | 483 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 815 | 833 |
| IPR000048 | IQ_motif_EF-hand-BS | Pfam | 838 | 857 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 639 | 671 |
| IPR002110 | Ankyrin_rpt | SMART | 639 | 668 |
| IPR002110 | Ankyrin_rpt | SMART | 678 | 707 |
| IPR036770 | Ankyrin_rpt-contain_sf | Gene3D | 569 | 711 |
| IPR013783 | Ig-like_fold | Gene3D | 399 | 494 |
| IPR002110 | Ankyrin_rpt | ProSiteProfiles | 606 | 638 |
| IPR005559 | CG-1_dom | Pfam | 14 | 94 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 813 | 842 |
| IPR005559 | CG-1_dom | SMART | 1 | 96 |
| IPR036770 | Ankyrin_rpt-contain_sf | SUPERFAMILY | 585 | 700 |
| IPR014756 | Ig_E-set | SUPERFAMILY | 406 | 491 |
| IPR000048 | IQ_motif_EF-hand-BS | ProSiteProfiles | 836 | 860 |
| IPR005559 | CG-1_dom | ProSiteProfiles | 1 | 101 |
| IPR027417 | P-loop_NTPase | SUPERFAMILY | 810 | 863 |
No CAZYmes available for this sequence
| No external refs found! |