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  5. Sobic.001G477400.1

Sobic.001G477400.1


Description : RNI-like superfamily protein


Gene families : OG_01_0010839 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010839_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G477400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G477400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_208


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036047 F-box-like_dom_sf SUPERFAMILY 21 59
IPR001611 Leu-rich_rpt Pfam 508 527
IPR041567 COI1_F-box Pfam 24 63
IPR032675 LRR_dom_sf Gene3D 64 602
IPR041101 Transp_inhibit Pfam 83 131
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 149 174
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 459 482
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 123 147
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 483 507
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 399 423
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 508 532

No CAZYmes available for this sequence

No external refs found!