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Description : lipoxygenase 3
Gene families : OG_01_0003664 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003664_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G483400.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G483400.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_39 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_46 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 334 | 419 |
| IPR013819 | LipOase_C | ProSiteProfiles | 230 | 924 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 90 | 231 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 577 | 591 |
| IPR001246 | LipOase_plant | PRINTS | 407 | 423 |
| IPR001246 | LipOase_plant | PRINTS | 513 | 537 |
| IPR001246 | LipOase_plant | PRINTS | 262 | 278 |
| IPR001246 | LipOase_plant | PRINTS | 362 | 383 |
| IPR001246 | LipOase_plant | PRINTS | 294 | 313 |
| IPR001246 | LipOase_plant | PRINTS | 197 | 215 |
| IPR001246 | LipOase_plant | PRINTS | 223 | 244 |
| IPR001246 | LipOase_plant | PRINTS | 446 | 465 |
| IPR001246 | LipOase_plant | PRINTS | 837 | 851 |
| IPR013819 | LipOase_C | PRINTS | 597 | 617 |
| IPR013819 | LipOase_C | PRINTS | 559 | 576 |
| IPR013819 | LipOase_C | PRINTS | 577 | 594 |
| IPR000907 | LipOase | PANTHER | 22 | 923 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 101 | 227 |
| IPR020834 | LipOase_CS | ProSitePatterns | 604 | 614 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 90 | 228 |
| IPR013819 | LipOase_C | Pfam | 239 | 907 |
| IPR001024 | PLAT/LH2_dom | SMART | 88 | 228 |
| IPR001024 | PLAT/LH2_dom | Pfam | 163 | 226 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 232 | 924 |
No CAZYmes available for this sequence
| No external refs found! |