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  5. Sobic.001G514000.1

Sobic.001G514000.1


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0008088 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008088_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G514000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G514000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_201
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_207


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032675 LRR_dom_sf Gene3D 448 548
IPR001611 Leu-rich_rpt Pfam 374 396
IPR001611 Leu-rich_rpt Pfam 399 422
IPR036047 F-box-like_dom_sf SUPERFAMILY 18 57
IPR032675 LRR_dom_sf Gene3D 55 446
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 450 474
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 322 347
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 106 131
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 400 424
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 477 502
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 503 528
IPR006553 Leu-rich_rpt_Cys-con_subtyp SMART 374 399

No CAZYmes available for this sequence

No external refs found!