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Description : expansin B2
Gene families : OG_01_0025329 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0025329_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.001G539820.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.001G539820.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_416 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_136 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005576 | extracellular region | ISM | GOs from InterProScan |
| BP | GO:0019953 | sexual reproduction | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036749 | Expansin_CBD_sf | SUPERFAMILY | 172 | 264 |
| IPR007117 | Expansin_CBD | Pfam | 173 | 254 |
| IPR007112 | Expansin/allergen_DPBB_dom | ProSiteProfiles | 66 | 172 |
| IPR007117 | Expansin_CBD | ProSiteProfiles | 184 | 265 |
| IPR005795 | LolPI | PRINTS | 144 | 159 |
| IPR005795 | LolPI | PRINTS | 105 | 115 |
| IPR005795 | LolPI | PRINTS | 241 | 258 |
| IPR005795 | LolPI | PRINTS | 221 | 238 |
| IPR005795 | LolPI | PRINTS | 175 | 190 |
| IPR005795 | LolPI | PRINTS | 122 | 137 |
| IPR005795 | LolPI | PRINTS | 191 | 206 |
| IPR005795 | LolPI | PRINTS | 85 | 96 |
| IPR007118 | Expan_Lol_pI | PRINTS | 87 | 105 |
| IPR007118 | Expan_Lol_pI | PRINTS | 65 | 83 |
| IPR007118 | Expan_Lol_pI | PRINTS | 212 | 226 |
| IPR007118 | Expan_Lol_pI | PRINTS | 45 | 60 |
| IPR007118 | Expan_Lol_pI | PRINTS | 155 | 171 |
| IPR007118 | Expan_Lol_pI | PRINTS | 251 | 265 |
| IPR036749 | Expansin_CBD_sf | Gene3D | 168 | 266 |
| IPR009009 | RlpA-like_DPBB | Pfam | 84 | 161 |
| IPR036908 | RlpA-like_sf | Gene3D | 28 | 167 |
| IPR036908 | RlpA-like_sf | SUPERFAMILY | 37 | 169 |
| IPR007112 | Expansin/allergen_DPBB_dom | SMART | 83 | 162 |
No CAZYmes available for this sequence
| No external refs found! |