Sobic.002G001300.3

Description : laccase 7

Gene families : OG_01_0001268 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001268_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G001300.3
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G001300.3	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_219

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR011706	Cu-oxidase_C	Pfam	431	512
IPR002355	Cu_oxidase_Cu_BS	ProSitePatterns	493	504
IPR001117	Cu-oxidase_2nd	Pfam	124	228
IPR008972	Cupredoxin	SUPERFAMILY	114	530
IPR008972	Cupredoxin	Gene3D	122	323
IPR008972	Cupredoxin	Gene3D	353	530
IPR045087	Cu-oxidase_fam	PANTHER	1	530

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA1	358	531	3e-52	101	505

External Links

No external refs found!