Sobic.002G002800.1

Description : glutamate receptor 3.4

Gene families : OG_01_0004965 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004965_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G002800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G002800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_93
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_59

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated monoatomic ion channel activity	ISM	GOs from InterProScan
CC	GO:0016020	membrane	ISM	GOs from InterProScan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR017103	Iontropic_Glu_rcpt_pln	PIRSF	12	980
IPR001320	Iontro_rcpt_C	Pfam	848	881
IPR028082	Peripla_BP_I	SUPERFAMILY	36	497
IPR001828	ANF_lig-bd_rcpt	Pfam	59	414
IPR001638	Solute-binding_3/MltF_N	Pfam	519	847
IPR001320	Iontro_rcpt_C	SMART	505	848

No CAZYmes available for this sequence

External Links

No external refs found!