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  5. Sobic.002G020700.1

Sobic.002G020700.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0002092 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002092_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G020700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G020700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_203


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015155 PFU Pfam 336 445
IPR001680 WD40_rpt ProSiteProfiles 142 173
IPR019775 WD40_repeat_CS ProSitePatterns 80 94
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 5 301
IPR013535 PUL_dom Pfam 483 747
IPR001680 WD40_rpt Pfam 99 133
IPR001680 WD40_rpt Pfam 255 289
IPR001680 WD40_rpt Pfam 215 252
IPR001680 WD40_rpt Pfam 176 211
IPR001680 WD40_rpt Pfam 10 40
IPR001680 WD40_rpt SMART 96 134
IPR001680 WD40_rpt SMART 174 212
IPR001680 WD40_rpt SMART 253 290
IPR001680 WD40_rpt SMART 214 252
IPR001680 WD40_rpt SMART 3 41
IPR001680 WD40_rpt SMART 49 93
IPR001680 WD40_rpt SMART 135 173
IPR038122 PFU_sf Gene3D 376 448
IPR001680 WD40_rpt ProSiteProfiles 181 211
IPR001680 WD40_rpt ProSiteProfiles 10 40
IPR011989 ARM-like Gene3D 481 752
IPR001680 WD40_rpt ProSiteProfiles 103 133
IPR001680 WD40_rpt ProSiteProfiles 56 102
IPR013535 PUL_dom ProSiteProfiles 481 752
IPR020472 G-protein_beta_WD-40_rep PRINTS 239 253
IPR020472 G-protein_beta_WD-40_rep PRINTS 160 174
IPR020472 G-protein_beta_WD-40_rep PRINTS 199 213
IPR015155 PFU ProSiteProfiles 356 452
IPR001680 WD40_rpt ProSiteProfiles 221 252
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 1 308

No CAZYmes available for this sequence

No external refs found!