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  5. Sobic.002G049700.1

Sobic.002G049700.1


Description : K+ transporter 1


Gene families : OG_01_0005370 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005370_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G049700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G049700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_33
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_36


Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity ISM GOs from InterProScan
MF GO:0005249 voltage-gated potassium channel activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006811 monoatomic ion transport ISM GOs from InterProScan
BP GO:0006813 potassium ion transport ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005821 Ion_trans_dom Pfam 64 307
IPR000595 cNMP-bd_dom SMART 380 497
IPR002110 Ankyrin_rpt Pfam 531 621
IPR000595 cNMP-bd_dom CDD 380 485
IPR014710 RmlC-like_jellyroll Gene3D 345 506
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 507 712
IPR002110 Ankyrin_rpt SMART 559 588
IPR002110 Ankyrin_rpt SMART 526 555
IPR002110 Ankyrin_rpt SMART 657 686
IPR002110 Ankyrin_rpt SMART 592 621
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 274 285
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 248 265
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 98 108
IPR003938 K_chnl_volt-dep_EAG/ELK/ERG PRINTS 292 301
IPR002110 Ankyrin_rpt ProSiteProfiles 592 624
IPR021789 KHA_dom ProSiteProfiles 841 919
IPR045319 KAT/AKT PANTHER 4 917
IPR000595 cNMP-bd_dom Pfam 400 484
IPR036770 Ankyrin_rpt-contain_sf Gene3D 527 711
IPR002110 Ankyrin_rpt ProSiteProfiles 657 689
IPR002110 Ankyrin_rpt ProSiteProfiles 559 591
IPR000595 cNMP-bd_dom ProSiteProfiles 380 482
IPR018490 cNMP-bd_dom_sf SUPERFAMILY 305 500
IPR002110 Ankyrin_rpt Pfam 655 698
IPR021789 KHA_dom Pfam 841 903

No CAZYmes available for this sequence

No external refs found!