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  5. Sobic.002G058500.1

Sobic.002G058500.1


Description : FAD-linked oxidases family protein


Gene families : OG_01_0001112 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001112_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G058500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G058500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_237
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_199


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0016491 oxidoreductase activity ISM GOs from InterProScan
MF GO:0050660 flavin adenine dinucleotide binding ISM GOs from InterProScan
MF GO:0071949 FAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR004113 FAD-bd_oxidored_4_C Pfam 315 555
IPR006094 Oxid_FAD_bind_N Pfam 139 274
IPR016171 Vanillyl_alc_oxidase_C-sub2 Gene3D 516 556
IPR016167 FAD-bd_PCMH_sub1 Gene3D 87 188
IPR016166 FAD-bd_PCMH ProSiteProfiles 133 312
IPR016164 FAD-linked_Oxase-like_C SUPERFAMILY 316 557
IPR036318 FAD-bd_PCMH-like_sf SUPERFAMILY 102 309
IPR016169 FAD-bd_PCMH_sub2 Gene3D 191 310
HMM Family HMM Length Query Length e-Value Query Start Query End
AA4 522 562 4.9e-18 104 274
No external refs found!