Sobic.002G068100.2

Description : DDT domain superfamily

Gene families : OG_01_0009366 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009366_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G068100.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G068100.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_142
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_225

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
CC	GO:0031010	ISWI-type complex	None	Extended
CC	GO:0031213	RSF complex	ISM	GOs from InterProScan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
CC	GO:0070603	SWI/SNF superfamily-type complex	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0140513	nuclear protein-containing complex	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1904949	ATPase complex	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR036638	HLH_DNA-bd_sf	SUPERFAMILY	151	221
IPR011598	bHLH_dom	SMART	159	209
IPR028938	Rsf1-like	PANTHER	119	844
IPR036638	HLH_DNA-bd_sf	Gene3D	150	226
IPR011598	bHLH_dom	Pfam	157	204
IPR011598	bHLH_dom	ProSiteProfiles	153	203

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.002G068100.2

Expression Profile

Co-expression Networks

Functional Annotation