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  5. Sobic.002G077900.1

Sobic.002G077900.1


Description : eukaryotic translation initiation factor 3E


Gene families : OG_01_0006604 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006604_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G077900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G077900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_94


Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
CC GO:0005852 eukaryotic translation initiation factor 3 complex ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR016650 eIF3e PANTHER 1 436
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 75 196
IPR016650 eIF3e PIRSF 1 439
IPR000717 PCI_dom ProSiteProfiles 219 403
IPR000717 PCI_dom SMART 332 416
IPR016650 eIF3e Hamap 2 429
IPR000717 PCI_dom Pfam 285 399
IPR019010 eIF3e_N SMART 5 137
IPR019010 eIF3e_N Pfam 5 137
IPR036390 WH_DNA-bd_sf SUPERFAMILY 329 401

No CAZYmes available for this sequence

No external refs found!