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  5. Sobic.002G079200.1

Sobic.002G079200.1


Description : EF hand calcium-binding protein family


Gene families : OG_01_0064074 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0064074_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G079200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G079200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_207
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom ProSiteProfiles 112 147
IPR011992 EF-hand-dom_pair SUPERFAMILY 111 179
IPR002048 EF_hand_dom Pfam 115 180
IPR002048 EF_hand_dom CDD 116 179
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 163 175
IPR002048 EF_hand_dom SMART 154 182
IPR002048 EF_hand_dom SMART 116 144
IPR002048 EF_hand_dom ProSiteProfiles 150 184

No CAZYmes available for this sequence

No external refs found!