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  5. Sobic.002G096000.1

Sobic.002G096000.1


Description : Copper amine oxidase family protein


Gene families : OG_01_0000229 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000229_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G096000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G096000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_266
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_90


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0008131 primary amine oxidase activity ISM GOs from InterProScan
BP GO:0009308 amine metabolic process ISM GOs from InterProScan
MF GO:0048038 quinone binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015798 Cu_amine_oxidase_C Pfam 275 690
IPR000269 Cu_amine_oxidase ProSitePatterns 655 668
IPR016182 Cu_amine_oxidase_N-reg SUPERFAMILY 25 111
IPR000269 Cu_amine_oxidase PANTHER 1 711
IPR036460 Cu_amine_oxidase_C_sf SUPERFAMILY 262 698
IPR036460 Cu_amine_oxidase_C_sf Gene3D 267 700
IPR000269 Cu_amine_oxidase ProSitePatterns 425 438
IPR016182 Cu_amine_oxidase_N-reg SUPERFAMILY 158 262
IPR015802 Cu_amine_oxidase_N3 Pfam 158 248
IPR015800 Cu_amine_oxidase_N2 Pfam 26 110

No CAZYmes available for this sequence

No external refs found!