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  5. Sobic.002G105300.1

Sobic.002G105300.1


Description : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein


Gene families : OG_01_0001106 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001106_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G105300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G105300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_10
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_38


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002413 V5_allergen-like PRINTS 123 142
IPR002413 V5_allergen-like PRINTS 50 68
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 152 163
IPR001283 CRISP-related PRINTS 50 68
IPR001283 CRISP-related PRINTS 124 140
IPR001283 CRISP-related PRINTS 98 111
IPR001283 CRISP-related PRINTS 152 165
IPR018244 Allrgn_V5/Tpx1_CS ProSitePatterns 125 135
IPR035940 CAP_sf SUPERFAMILY 28 169
IPR035940 CAP_sf Gene3D 23 169
IPR014044 CAP_domain Pfam 35 157
IPR014044 CAP_domain SMART 29 165
IPR001283 CRISP-related PANTHER 2 169

No CAZYmes available for this sequence

No external refs found!