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  5. Sobic.002G112100.1

Sobic.002G112100.1


Description : DEA(D/H)-box RNA helicase family protein


Gene families : OG_01_0010796 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0010796_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G112100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G112100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_94


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom Pfam 117 288
IPR001650 Helicase_C ProSiteProfiles 313 476
IPR014001 Helicase_ATP-bd SMART 111 317
IPR027417 P-loop_NTPase SUPERFAMILY 168 450
IPR000629 RNA-helicase_DEAD-box_CS ProSitePatterns 246 254
IPR001650 Helicase_C Pfam 328 437
IPR014001 Helicase_ATP-bd ProSiteProfiles 123 300
IPR027417 P-loop_NTPase Gene3D 305 479
IPR001650 Helicase_C SMART 356 437
IPR027417 P-loop_NTPase Gene3D 68 304

No CAZYmes available for this sequence

No external refs found!