Sobic.002G114900.1

Description : exportin 1A

Gene families : OG_01_0000491 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000491_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G114900.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G114900.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_84

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005049	nuclear export signal receptor activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0006611	protein export from nucleus	ISM	GOs from InterProScan
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	ISM	GOs from InterProScan
BP	GO:0006913	nucleocytoplasmic transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0031267	small GTPase binding	ISM	GOs from InterProScan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
MF	GO:0051020	GTPase binding	None	Extended
BP	GO:0051168	nuclear export	None	Extended
BP	GO:0051169	nuclear transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0140104	molecular carrier activity	None	Extended
MF	GO:0140142	nucleocytoplasmic carrier activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041235	Exp1_repeat_2	Pfam	402	469
IPR016024	ARM-type_fold	SUPERFAMILY	21	1026
IPR013598	Exportin-1/Importin-b-like	Pfam	115	258
IPR014877	XPO1_C_dom	Pfam	706	1025
IPR001494	Importin-beta_N	ProSiteProfiles	37	103
IPR001494	Importin-beta_N	SMART	37	103
IPR041123	CRM1_repeat	Pfam	336	371
IPR040485	XPO1_repeat_3	Pfam	482	532
IPR014877	XPO1_C_dom	SMART	706	1026
IPR001494	Importin-beta_N	Pfam	37	103
IPR011989	ARM-like	Gene3D	1	1050
IPR045065	XPO1/5	PANTHER	4	1067

No CAZYmes available for this sequence

External Links

No external refs found!