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  5. Sobic.002G121800.1

Sobic.002G121800.1


Description : inositol transporter 4


Gene families : OG_01_0007230 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007230_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G121800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G121800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_19
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_38


Type GO Term Name Evidence Source
CC GO:0016020 membrane ISM GOs from InterProScan
MF GO:0022857 transmembrane transporter activity ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR020846 MFS_dom ProSiteProfiles 29 548
IPR036259 MFS_trans_sf SUPERFAMILY 454 556
IPR036259 MFS_trans_sf SUPERFAMILY 21 384
IPR005829 Sugar_transporter_CS ProSitePatterns 128 153
IPR003663 Sugar/inositol_transpt TIGRFAM 13 383
IPR003663 Sugar/inositol_transpt PRINTS 288 298
IPR003663 Sugar/inositol_transpt PRINTS 460 481
IPR003663 Sugar/inositol_transpt PRINTS 483 495
IPR003663 Sugar/inositol_transpt PRINTS 123 142
IPR003663 Sugar/inositol_transpt PRINTS 37 47
IPR036259 MFS_trans_sf Gene3D 444 569
IPR005828 MFS_sugar_transport-like Pfam 30 384
IPR005828 MFS_sugar_transport-like Pfam 453 558
IPR005829 Sugar_transporter_CS ProSitePatterns 333 349
IPR036259 MFS_trans_sf Gene3D 20 388

No CAZYmes available for this sequence

No external refs found!