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  5. Sobic.002G124400.1

Sobic.002G124400.1


Description : expansin B4


Gene families : OG_01_0004607 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004607_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G124400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G124400.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_15


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036908 RlpA-like_sf SUPERFAMILY 78 227
IPR009009 RlpA-like_DPBB Pfam 115 186
IPR007112 Expansin/allergen_DPBB_dom SMART 114 198
IPR007118 Expan_Lol_pI PRINTS 191 207
IPR007118 Expan_Lol_pI PRINTS 77 92
IPR007118 Expan_Lol_pI PRINTS 118 136
IPR007118 Expan_Lol_pI PRINTS 249 263
IPR007118 Expan_Lol_pI PRINTS 95 113
IPR007118 Expan_Lol_pI PRINTS 288 302
IPR005795 LolPI PRINTS 258 275
IPR005795 LolPI PRINTS 136 146
IPR005795 LolPI PRINTS 278 295
IPR005795 LolPI PRINTS 116 127
IPR005795 LolPI PRINTS 212 227
IPR005795 LolPI PRINTS 228 243
IPR036749 Expansin_CBD_sf SUPERFAMILY 209 302
IPR007117 Expansin_CBD Pfam 210 291
IPR036908 RlpA-like_sf Gene3D 60 203
IPR007117 Expansin_CBD ProSiteProfiles 221 302
IPR036749 Expansin_CBD_sf Gene3D 204 302
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 96 208

No CAZYmes available for this sequence

No external refs found!