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  5. Sobic.002G124500.1

Sobic.002G124500.1


Description : expansin B4


Gene families : OG_01_0004607 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004607_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G124500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G124500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_170
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8


Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM GOs from InterProScan
BP GO:0019953 sexual reproduction ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR005795 LolPI PRINTS 163 178
IPR005795 LolPI PRINTS 263 280
IPR005795 LolPI PRINTS 233 248
IPR005795 LolPI PRINTS 123 134
IPR005795 LolPI PRINTS 217 232
IPR005795 LolPI PRINTS 283 300
IPR005795 LolPI PRINTS 185 200
IPR007117 Expansin_CBD ProSiteProfiles 226 307
IPR036908 RlpA-like_sf Gene3D 70 208
IPR036749 Expansin_CBD_sf Gene3D 209 307
IPR036749 Expansin_CBD_sf SUPERFAMILY 214 307
IPR036908 RlpA-like_sf SUPERFAMILY 76 212
IPR009009 RlpA-like_DPBB Pfam 122 195
IPR007112 Expansin/allergen_DPBB_dom ProSiteProfiles 103 213
IPR007112 Expansin/allergen_DPBB_dom SMART 121 203
IPR007118 Expan_Lol_pI PRINTS 84 99
IPR007118 Expan_Lol_pI PRINTS 102 120
IPR007118 Expan_Lol_pI PRINTS 125 143
IPR007118 Expan_Lol_pI PRINTS 254 268
IPR007118 Expan_Lol_pI PRINTS 196 212
IPR007118 Expan_Lol_pI PRINTS 293 307
IPR007117 Expansin_CBD Pfam 215 296

No CAZYmes available for this sequence

No external refs found!