Sobic.002G131300.1

Description : Trimeric LpxA-like enzymes superfamily protein

Gene families : OG_01_0006915 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006915_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G131300.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G131300.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_310
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_37

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006643	membrane lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006664	glycolipid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009245	lipid A biosynthetic process	ISM	GOs from InterProScan
BP	GO:0009247	glycolipid biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016410	N-acyltransferase activity	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	ISM	GOs from InterProScan
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0046467	membrane lipid biosynthetic process	None	Extended
BP	GO:0046493	lipid A metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901269	lipooligosaccharide metabolic process	None	Extended
BP	GO:1901271	lipooligosaccharide biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1903509	liposaccharide metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR007691	LpxD	CDD	61	268
IPR007691	LpxD	TIGRFAM	62	279
IPR001451	Hexapep	Pfam	100	133
IPR001451	Hexapep	Pfam	71	98
IPR001451	Hexapep	Pfam	178	212
IPR018357	Hexapep_transf_CS	ProSitePatterns	73	101
IPR011004	Trimer_LpxA-like_sf	SUPERFAMILY	53	271
IPR007691	LpxD	PANTHER	37	280

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.002G131300.1

Expression Profile

Co-expression Networks

Functional Annotation