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  5. Sobic.002G131700.1

Sobic.002G131700.1


Description : 31-kDa RNA binding protein


Gene families : OG_01_0003430 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003430_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G131700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G131700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_274
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_213


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 60 198
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 199 293
IPR000504 RRM_dom ProSiteProfiles 210 288
IPR035979 RBD_domain_sf SUPERFAMILY 111 207
IPR000504 RRM_dom Pfam 212 282
IPR000504 RRM_dom Pfam 118 187
IPR000504 RRM_dom ProSiteProfiles 116 194
IPR000504 RRM_dom SMART 211 284
IPR000504 RRM_dom SMART 117 190
IPR035979 RBD_domain_sf SUPERFAMILY 203 292

No CAZYmes available for this sequence

No external refs found!