Sobic.002G136200.2

Description : beta-amylase 7

Gene families : OG_01_0008466 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008466_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G136200.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G136200.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_329
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_210

Type	GO Term	Name	Evidence	Source
BP	GO:0000272	polysaccharide catabolic process	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0016052	carbohydrate catabolic process	None	Extended
MF	GO:0016160	amylase activity	None	Extended
MF	GO:0016161	beta-amylase activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008540	BES1_N	Pfam	62	136
IPR001554	Glyco_hydro_14	PANTHER	67	131
IPR001554	Glyco_hydro_14	PANTHER	135	596
IPR001554	Glyco_hydro_14	Pfam	162	579
IPR001554	Glyco_hydro_14	PRINTS	402	421
IPR001554	Glyco_hydro_14	PRINTS	471	494
IPR001554	Glyco_hydro_14	PRINTS	329	351
IPR001554	Glyco_hydro_14	PRINTS	453	464
IPR001554	Glyco_hydro_14	PRINTS	214	232
IPR001554	Glyco_hydro_14	PRINTS	511	533
IPR001554	Glyco_hydro_14	PRINTS	193	207
IPR001554	Glyco_hydro_14	PRINTS	236	257
IPR001554	Glyco_hydro_14	PRINTS	436	452
IPR001371	Glyco_hydro_14B_pln	PRINTS	577	591
IPR001371	Glyco_hydro_14B_pln	PRINTS	474	484
IPR001371	Glyco_hydro_14B_pln	PRINTS	319	328
IPR001371	Glyco_hydro_14B_pln	PRINTS	562	576
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	153	592
IPR018238	Glyco_hydro_14_CS	ProSitePatterns	240	248

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH14	412	597	4.2e-178	162	579

External Links

No external refs found!