1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G145400.1

Sobic.002G145400.1


Description : Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein


Gene families : OG_01_0048924 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0048924_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G145400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G145400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_163
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_61


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000270 PB1_dom SMART 456 535
IPR019734 TPR_repeat ProSiteProfiles 65 98
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 64 185
IPR044517 PHOX1-4 PANTHER 56 927
IPR019734 TPR_repeat ProSiteProfiles 139 172
IPR000270 PB1_dom ProSiteProfiles 456 535
IPR000270 PB1_dom Pfam 458 534
IPR019734 TPR_repeat SMART 103 138
IPR019734 TPR_repeat SMART 65 98
IPR019734 TPR_repeat SMART 139 172
IPR011990 TPR-like_helical_dom_sf Gene3D 62 216

No CAZYmes available for this sequence

No external refs found!