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Description : trithorax-like protein 2
Gene families : OG_01_0004191 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004191_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G148400.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G148400.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_262 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_239 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| CC | GO:0005634 | nucleus | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR011011 | Znf_FYVE_PHD | SUPERFAMILY | 559 | 633 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 557 | 618 |
| IPR003888 | FYrich_N | SMART | 419 | 463 |
| IPR003616 | Post-SET_dom | SMART | 985 | 1001 |
| IPR013083 | Znf_RING/FYVE/PHD | Gene3D | 619 | 748 |
| IPR034732 | EPHD | ProSiteProfiles | 622 | 746 |
| IPR000313 | PWWP_dom | ProSiteProfiles | 266 | 329 |
| IPR000313 | PWWP_dom | SMART | 264 | 327 |
| IPR003889 | FYrich_C | Pfam | 469 | 547 |
| IPR001965 | Znf_PHD | SMART | 680 | 746 |
| IPR001965 | Znf_PHD | SMART | 568 | 615 |
| IPR003888 | FYrich_N | Pfam | 410 | 460 |
| IPR003888 | FYrich_N | ProSiteProfiles | 404 | 463 |
| IPR019787 | Znf_PHD-finger | ProSiteProfiles | 566 | 617 |
| IPR000313 | PWWP_dom | Pfam | 267 | 353 |
| IPR003616 | Post-SET_dom | ProSiteProfiles | 985 | 1001 |
| IPR001214 | SET_dom | ProSiteProfiles | 861 | 979 |
| IPR002999 | Tudor | SMART | 170 | 228 |
| IPR041956 | ATX1/2_ePHD | CDD | 625 | 745 |
| IPR003889 | FYrich_C | ProSiteProfiles | 467 | 550 |
| IPR001214 | SET_dom | Pfam | 872 | 978 |
| IPR003889 | FYrich_C | SMART | 471 | 555 |
| IPR019786 | Zinc_finger_PHD-type_CS | ProSitePatterns | 569 | 614 |
| IPR001214 | SET_dom | SMART | 861 | 985 |
No CAZYmes available for this sequence
| No external refs found! |