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  5. Sobic.002G151800.2

Sobic.002G151800.2


Description : alpha-galactosidase 2


Gene families : OG_01_0009290 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009290_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G151800.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_226


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002241 Glyco_hydro_27 PANTHER 2 399
IPR000111 Glyco_hydro_27/36_CS ProSitePatterns 80 96
IPR013780 Glyco_hydro_b Gene3D 311 399
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 36 308
IPR013785 Aldolase_TIM Gene3D 37 310
IPR002241 Glyco_hydro_27 Pfam 44 308
IPR002241 Glyco_hydro_27 PRINTS 116 137
IPR002241 Glyco_hydro_27 PRINTS 75 90
IPR002241 Glyco_hydro_27 PRINTS 39 58
IPR002241 Glyco_hydro_27 PRINTS 264 285
IPR002241 Glyco_hydro_27 PRINTS 178 196
IPR002241 Glyco_hydro_27 PRINTS 151 168
IPR002241 Glyco_hydro_27 PRINTS 243 262
IPR002241 Glyco_hydro_27 CDD 45 308
IPR041233 Melibiase_C Pfam 320 396
HMM Family HMM Length Query Length e-Value Query Start Query End
GH27 229 400 3.4e-92 141 373
No external refs found!