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  5. Sobic.002G157400.1

Sobic.002G157400.1


Description : ankyrin repeat family protein


Gene families : OG_01_0002313 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002313_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G157400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G157400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_3
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_106


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002110 Ankyrin_rpt PRINTS 151 166
IPR002110 Ankyrin_rpt PRINTS 259 273
IPR002110 Ankyrin_rpt ProSiteProfiles 182 208
IPR002110 Ankyrin_rpt Pfam 87 176
IPR002110 Ankyrin_rpt Pfam 229 297
IPR011990 TPR-like_helical_dom_sf Gene3D 336 432
IPR036770 Ankyrin_rpt-contain_sf SUPERFAMILY 80 297
IPR002110 Ankyrin_rpt ProSiteProfiles 116 149
IPR002110 Ankyrin_rpt ProSiteProfiles 150 175
IPR002110 Ankyrin_rpt Pfam 185 209
IPR036770 Ankyrin_rpt-contain_sf Gene3D 40 242
IPR011990 TPR-like_helical_dom_sf SUPERFAMILY 338 430
IPR036770 Ankyrin_rpt-contain_sf Gene3D 244 298
IPR002110 Ankyrin_rpt SMART 182 211
IPR002110 Ankyrin_rpt SMART 150 181
IPR002110 Ankyrin_rpt SMART 212 241
IPR002110 Ankyrin_rpt SMART 82 112
IPR002110 Ankyrin_rpt SMART 116 146
IPR002110 Ankyrin_rpt SMART 243 272
IPR002110 Ankyrin_rpt ProSiteProfiles 243 275

No CAZYmes available for this sequence

No external refs found!