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  5. Sobic.002G164700.1

Sobic.002G164700.1


Description : C2H2-like zinc finger protein


Gene families : OG_01_0001108 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001108_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G164700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G164700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_81
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_100


Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISM GOs from InterProScan
BP GO:0010468 regulation of gene expression ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036236 Znf_C2H2_sf SUPERFAMILY 257 291
IPR013087 Znf_C2H2_type ProSitePatterns 183 203
IPR013087 Znf_C2H2_type ProSiteProfiles 271 291
IPR013087 Znf_C2H2_type ProSiteProfiles 181 208
IPR043584 WIP1/2/3/4/5/6 PANTHER 5 356
IPR036236 Znf_C2H2_sf SUPERFAMILY 176 202
IPR013087 Znf_C2H2_type SMART 271 291
IPR013087 Znf_C2H2_type SMART 234 266
IPR013087 Znf_C2H2_type SMART 181 203

No CAZYmes available for this sequence

No external refs found!