Sobic.002G164800.2

Description : histone-lysine N-methyltransferase ASHH3

Gene families : OG_01_0004153 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004153_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G164800.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G164800.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_212
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_205

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	GOs from InterProScan
MF	GO:0018024	obsolete histone lysine N-methyltransferase activity	ISM	GOs from InterProScan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR025787	Hist-Lys_N-MeTrfase_SET2_plant	ProSiteProfiles	50	287
IPR003616	Post-SET_dom	ProSiteProfiles	240	256
IPR001214	SET_dom	Pfam	128	233
IPR006560	AWS_dom	SMART	66	116
IPR001214	SET_dom	SMART	117	240
IPR001214	SET_dom	ProSiteProfiles	117	234
IPR003616	Post-SET_dom	SMART	240	256
IPR006560	AWS_dom	ProSiteProfiles	66	115

No CAZYmes available for this sequence

External Links

No external refs found!