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  5. Sobic.002G167000.1

Sobic.002G167000.1


Description : phosphoenolpyruvate carboxylase 1


Gene families : OG_01_0000128 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000128_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G167000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G167000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_58
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_164


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
BP GO:0006099 tricarboxylic acid cycle ISM GOs from InterProScan
MF GO:0008964 phosphoenolpyruvate carboxylase activity ISM GOs from InterProScan
BP GO:0015977 carbon fixation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR033129 PEPCASE_His_AS ProSitePatterns 593 605
IPR015813 Pyrv/PenolPyrv_Kinase-like_dom SUPERFAMILY 35 967
IPR022805 PEP_COase_bac/pln-type Hamap 25 967
IPR021135 PEP_COase PANTHER 1 967
IPR021135 PEP_COase PRINTS 222 238
IPR021135 PEP_COase PRINTS 765 791
IPR021135 PEP_COase PRINTS 591 611
IPR021135 PEP_COase PRINTS 169 182
IPR021135 PEP_COase PRINTS 282 297
IPR021135 PEP_COase PRINTS 633 662
IPR021135 PEP_COase PRINTS 442 462
IPR021135 PEP_COase Pfam 37 967
IPR018129 PEP_COase_Lys_AS ProSitePatterns 170 181

No CAZYmes available for this sequence

No external refs found!