Sobic.002G168400.1

Description : Disease resistance protein (CC-NBS-LRR class) family

Gene families : OG_01_0004561 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004561_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G168400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G168400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_312
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_135

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	ISM	GOs from InterProScan
MF	GO:0046983	protein dimerization activity	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR032675	LRR_dom_sf	Gene3D	519	911
IPR027417	P-loop_NTPase	Gene3D	165	333
IPR001611	Leu-rich_rpt	ProSiteProfiles	683	704
IPR038005	RX-like_CC	CDD	18	129
IPR011598	bHLH_dom	ProSiteProfiles	1032	1082
IPR044974	Disease_R_plants	PANTHER	15	940
IPR002182	NB-ARC	Pfam	187	414
IPR011598	bHLH_dom	Pfam	1038	1083
IPR045239	bHLH95_bHLH	CDD	1037	1089
IPR036638	HLH_DNA-bd_sf	Gene3D	1032	1103
IPR027417	P-loop_NTPase	SUPERFAMILY	173	442
IPR042197	Apaf_helical	Gene3D	341	433
IPR036638	HLH_DNA-bd_sf	SUPERFAMILY	1036	1096
IPR011598	bHLH_dom	SMART	1038	1088
IPR041118	Rx_N	Pfam	18	87

No CAZYmes available for this sequence

External Links

No external refs found!