Sobic.002G174900.1

Description : nitrogen fixation S (NIFS)-like 1

Gene families : OG_01_0008130 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008130_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G174900.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G174900.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_228
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_173

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016226	iron-sulfur cluster assembly	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	None	Extended
MF	GO:0016783	sulfurtransferase activity	None	Extended
MF	GO:0019842	vitamin binding	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	ISM	GOs from InterProScan
MF	GO:0031071	cysteine desulfurase activity	ISM	GOs from InterProScan
BP	GO:0031163	metallo-sulfur cluster assembly	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044571	[2Fe-2S] cluster assembly	ISM	GOs from InterProScan
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015422	PyrdxlP-dep_Trfase_small	Gene3D	55	416
IPR016454	Cysteine_dSase	PIRSF	52	432
IPR015421	PyrdxlP-dep_Trfase_major	Gene3D	65	310
IPR015424	PyrdxlP-dep_Trfase	SUPERFAMILY	53	438
IPR010240	Cys_deSase_IscS	PANTHER	47	437
IPR000192	Aminotrans_V_dom	Pfam	55	416
IPR020578	Aminotrans_V_PyrdxlP_BS	ProSitePatterns	244	263
IPR010240	Cys_deSase_IscS	TIGRFAM	52	452
IPR010240	Cys_deSase_IscS	Hamap	50	443

No CAZYmes available for this sequence

External Links

No external refs found!