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  5. Sobic.002G181400.1

Sobic.002G181400.1


Description : DWD (DDB1-binding WD40 protein) hypersensitive to ABA 1


Gene families : OG_01_0001856 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001856_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G181400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G181400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_272
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_164


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019775 WD40_repeat_CS ProSitePatterns 226 240
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 22 154
IPR001680 WD40_rpt ProSiteProfiles 96 129
IPR001680 WD40_rpt ProSiteProfiles 207 248
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 255 373
IPR042626 THOC6 PANTHER 19 374
IPR001680 WD40_rpt Pfam 93 129
IPR001680 WD40_rpt Pfam 201 239
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 55 348
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 157 254
IPR001680 WD40_rpt SMART 200 239
IPR001680 WD40_rpt SMART 327 365
IPR001680 WD40_rpt SMART 242 286
IPR001680 WD40_rpt SMART 89 130

No CAZYmes available for this sequence

No external refs found!