Sobic.002G185000.1

Description : zinc finger (AN1-like) family protein

Gene families : OG_01_0018704 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0018704_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G185000.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G185000.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_59
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_39

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000058	Znf_AN1	SMART	106	147
IPR000058	Znf_AN1	SMART	16	55
IPR000058	Znf_AN1	ProSiteProfiles	103	155
IPR035896	AN1-like_Znf	Gene3D	2	61
IPR000058	Znf_AN1	Pfam	106	145
IPR000058	Znf_AN1	Pfam	16	54
IPR035896	AN1-like_Znf	Gene3D	87	162
IPR035896	AN1-like_Znf	SUPERFAMILY	9	56
IPR035896	AN1-like_Znf	SUPERFAMILY	98	154

No CAZYmes available for this sequence

External Links

No external refs found!