1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.002G194500.1

Sobic.002G194500.1


Description : xyloglucan endotransglucosylase/hydrolase 28


Gene families : OG_01_0012343 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012343_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G194500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G194500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_26
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_230


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
CC GO:0005618 cell wall ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
BP GO:0006073 obsolete cellular glucan metabolic process ISM GOs from InterProScan
BP GO:0010411 xyloglucan metabolic process ISM GOs from InterProScan
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity ISM GOs from InterProScan
BP GO:0042546 cell wall biogenesis ISM GOs from InterProScan
CC GO:0048046 apoplast ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR010713 XET_C Pfam 271 305
IPR013320 ConA-like_dom_sf SUPERFAMILY 43 307
IPR000757 GH16 Pfam 58 228
IPR044791 Beta-glucanase/XTH PANTHER 6 317
IPR000757 GH16 ProSiteProfiles 26 236
IPR016455 XTH CDD 42 305

No CAZYmes available for this sequence

No external refs found!