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  5. Sobic.002G199500.1

Sobic.002G199500.1


Description : Calcium-binding EF-hand family protein


Gene families : OG_01_0014310 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014310_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G199500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G199500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_204
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_30


Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002048 EF_hand_dom CDD 127 185
IPR002048 EF_hand_dom Pfam 121 186
IPR011992 EF-hand-dom_pair SUPERFAMILY 103 185
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 169 181
IPR002048 EF_hand_dom ProSiteProfiles 118 153
IPR002048 EF_hand_dom ProSiteProfiles 156 189
IPR018247 EF_Hand_1_Ca_BS ProSitePatterns 131 143
IPR002048 EF_hand_dom SMART 160 188
IPR002048 EF_hand_dom SMART 122 150

No CAZYmes available for this sequence

No external refs found!