Sobic.002G245200.1

Description : Barwin-related endoglucanase

Gene families : OG_01_0012360 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012360_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G245200.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G245200.1	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_35

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009627	systemic acquired resistance	ISM	GOs from InterProScan
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
CC	GO:0048046	apoplast	ISM	GOs from InterProScan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR044206	EGC1/2	PANTHER	10	140
IPR007112	Expansin/allergen_DPBB_dom	SMART	55	133
IPR007112	Expansin/allergen_DPBB_dom	ProSiteProfiles	25	137
IPR036908	RlpA-like_sf	SUPERFAMILY	18	137
IPR009009	RlpA-like_DPBB	Pfam	56	133
IPR036908	RlpA-like_sf	Gene3D	29	136

No CAZYmes available for this sequence

External Links

No external refs found!