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  5. Sobic.002G249700.1

Sobic.002G249700.1


Description : wall associated kinase 5


Gene families : OG_01_0000061 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000061_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G249700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G249700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_38
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_131


Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
BP GO:0006468 protein phosphorylation ISM GOs from InterProScan
BP GO:0007166 cell surface receptor signaling pathway ISM GOs from InterProScan
MF GO:0030247 polysaccharide binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000742 EGF-like_dom SMART 241 288
IPR000742 EGF-like_dom SMART 292 328
IPR017441 Protein_kinase_ATP_BS ProSitePatterns 416 439
IPR000719 Prot_kinase_dom Pfam 413 679
IPR011009 Kinase-like_dom_sf SUPERFAMILY 395 695
IPR001881 EGF-like_Ca-bd_dom SMART 289 328
IPR000719 Prot_kinase_dom ProSiteProfiles 410 694
IPR008271 Ser/Thr_kinase_AS ProSitePatterns 533 545
IPR045274 WAK-like PANTHER 22 729
IPR018097 EGF_Ca-bd_CS ProSitePatterns 289 314
IPR025287 WAK_GUB Pfam 32 89
IPR000719 Prot_kinase_dom SMART 410 694

No CAZYmes available for this sequence

No external refs found!