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  5. Sevir.8G124500.1

Sevir.8G124500.1


Description : senescence-associated gene 12


Gene families : OG_01_0004346 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004346_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G124500.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G124500.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_30


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000169 Pept_cys_AS ProSitePatterns 156 167
IPR000668 Peptidase_C1A_C PRINTS 293 303
IPR000668 Peptidase_C1A_C PRINTS 309 315
IPR000668 Peptidase_C1A_C PRINTS 156 171
IPR013201 Prot_inhib_I29 Pfam 52 108
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 44 345
IPR000668 Peptidase_C1A_C Pfam 140 345
IPR025660 Pept_his_AS ProSitePatterns 291 301
IPR039417 Peptidase_C1A_papain-like CDD 140 344
IPR013201 Prot_inhib_I29 SMART 51 108
IPR000668 Peptidase_C1A_C SMART 138 345

No CAZYmes available for this sequence

No external refs found!