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  5. Sobic.002G261400.1

Sobic.002G261400.1


Description : beta glucosidase 11


Gene families : OG_01_0005678 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005678_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G261400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G261400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001360 Glyco_hydro_1 PRINTS 395 403
IPR001360 Glyco_hydro_1 PRINTS 313 327
IPR001360 Glyco_hydro_1 PRINTS 416 427
IPR001360 Glyco_hydro_1 PRINTS 461 473
IPR001360 Glyco_hydro_1 PRINTS 437 454
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 21 489
IPR001360 Glyco_hydro_1 PANTHER 14 499
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 38 52
IPR001360 Glyco_hydro_1 Pfam 32 489
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 504 1.1e-153 31 489
No external refs found!