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  5. Sevir.8G126200.1

Sevir.8G126200.1


Description : Sec23/Sec24 protein transport family protein


Gene families : OG_01_0001904 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001904_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G126200.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G126200.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_191
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_104


Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport ISM GOs from InterProScan
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
CC GO:0030127 COPII vesicle coat ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007123 Gelsolin-like_dom Pfam 994 1051
IPR006896 Sec23/24_trunk_dom Pfam 532 772
IPR029006 ADF-H/Gelsolin-like_dom_sf Gene3D 976 1098
IPR006895 Znf_Sec23_Sec24 Pfam 457 495
IPR036180 Gelsolin-like_dom_sf SUPERFAMILY 976 1118
IPR012990 Sec23_24_beta_S Pfam 777 860
IPR036174 Znf_Sec23_Sec24_sf SUPERFAMILY 444 530
IPR036175 Sec23/24_helical_dom_sf SUPERFAMILY 872 974
IPR006900 Sec23/24_helical_dom Pfam 872 967
IPR036465 vWFA_dom_sf SUPERFAMILY 532 772
IPR036465 vWFA_dom_sf Gene3D 534 774

No CAZYmes available for this sequence

No external refs found!