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  5. Sobic.002G270900.1

Sobic.002G270900.1


Description : Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein


Gene families : OG_01_0002053 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002053_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G270900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G270900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_15
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_233


Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
BP GO:0006355 regulation of DNA-templated transcription ISM GOs from InterProScan
MF GO:0008289 lipid binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR009057 Homeobox-like_sf SUPERFAMILY 106 181
IPR023393 START-like_dom_sf Gene3D 413 578
IPR001356 Homeobox_dom SMART 122 185
IPR042160 GLABRA2/ANL2/PDF2/ATML1-like PANTHER 13 864
IPR001356 Homeobox_dom Pfam 124 179
IPR002913 START_lipid-bd_dom ProSiteProfiles 332 583
IPR017970 Homeobox_CS ProSitePatterns 156 179
IPR002913 START_lipid-bd_dom SMART 341 580
IPR001356 Homeobox_dom ProSiteProfiles 121 181
IPR002913 START_lipid-bd_dom Pfam 344 579
IPR001356 Homeobox_dom CDD 124 181

No CAZYmes available for this sequence

No external refs found!