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  5. Sobic.002G278300.1

Sobic.002G278300.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G278300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G278300.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_95


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017949 Thaumatin_CS ProSitePatterns 94 110
IPR001938 Thaumatin ProSiteProfiles 32 247
IPR001938 Thaumatin PANTHER 13 264
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 32 248
IPR001938 Thaumatin PIRSF 1 288
IPR001938 Thaumatin Pfam 37 247
IPR001938 Thaumatin SMART 33 247
IPR037176 Osmotin/thaumatin-like_sf Gene3D 31 247
IPR001938 Thaumatin PRINTS 80 91
IPR001938 Thaumatin PRINTS 237 246
IPR001938 Thaumatin PRINTS 133 149
IPR001938 Thaumatin PRINTS 32 44
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 313 3.5e-89 37 247
No external refs found!