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  5. Sobic.002G279900.1

Sobic.002G279900.1


Description : glycosyl hydrolase family 35 protein


Gene families : OG_01_0009497 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009497_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G279900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G279900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_72


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
MF GO:0030246 carbohydrate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR031330 Gly_Hdrlase_35_cat Pfam 42 346
IPR041392 GHD Pfam 356 427
IPR019801 Glyco_hydro_35_CS ProSitePatterns 181 193
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 32 351
IPR043159 Lectin_gal-bd_sf Gene3D 736 835
IPR001944 Glycoside_Hdrlase_35 PRINTS 296 311
IPR001944 Glycoside_Hdrlase_35 PRINTS 624 638
IPR001944 Glycoside_Hdrlase_35 PRINTS 46 63
IPR001944 Glycoside_Hdrlase_35 PRINTS 259 274
IPR001944 Glycoside_Hdrlase_35 PRINTS 179 194
IPR001944 Glycoside_Hdrlase_35 PRINTS 315 331
IPR001944 Glycoside_Hdrlase_35 PRINTS 122 141
IPR001944 Glycoside_Hdrlase_35 PRINTS 67 85
IPR001944 Glycoside_Hdrlase_35 PRINTS 651 667
IPR000922 Lectin_gal-bd_dom Pfam 752 830
IPR001944 Glycoside_Hdrlase_35 PANTHER 9 829
IPR000922 Lectin_gal-bd_dom ProSiteProfiles 751 831
IPR008979 Galactose-bd-like_sf SUPERFAMILY 590 730
IPR008979 Galactose-bd-like_sf SUPERFAMILY 411 552
HMM Family HMM Length Query Length e-Value Query Start Query End
GH35 307 838 1.1e-109 43 346
No external refs found!