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  5. Sobic.002G282500.1

Sobic.002G282500.1


Description : phospholipase D delta


Gene families : OG_01_0009120 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009120_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G282500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G282500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_231
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_116


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004630 phospholipase D activity ISM GOs from InterProScan
MF GO:0005509 calcium ion binding ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0046470 phosphatidylcholine metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015679 PLipase_D_fam PANTHER 9 859
IPR025202 PLD-like_dom Pfam 624 741
IPR001736 PLipase_D/transphosphatidylase SMART 365 400
IPR001736 PLipase_D/transphosphatidylase SMART 705 732
IPR035892 C2_domain_sf Gene3D 17 189
IPR024632 PLipase_D_C Pfam 779 849
IPR000008 C2_dom SMART 19 157
IPR001736 PLipase_D/transphosphatidylase Pfam 366 400
IPR035892 C2_domain_sf SUPERFAMILY 15 182
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 705 732
IPR000008 C2_dom ProSiteProfiles 1 158
IPR011402 PLipase_D_pln PIRSF 7 859
IPR000008 C2_dom Pfam 18 160
IPR001736 PLipase_D/transphosphatidylase ProSiteProfiles 365 400

No CAZYmes available for this sequence

No external refs found!