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  5. Sobic.002G282600.3

Sobic.002G282600.3


Description : Copper amine oxidase family protein


Gene families : OG_01_0009345 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009345_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G282600.3
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G282600.3
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_62
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_33


Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding ISM GOs from InterProScan
MF GO:0008131 primary amine oxidase activity ISM GOs from InterProScan
BP GO:0009308 amine metabolic process ISM GOs from InterProScan
MF GO:0048038 quinone binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015798 Cu_amine_oxidase_C Pfam 225 621
IPR016182 Cu_amine_oxidase_N-reg SUPERFAMILY 93 211
IPR036460 Cu_amine_oxidase_C_sf SUPERFAMILY 217 621
IPR000269 Cu_amine_oxidase PANTHER 1 622
IPR036460 Cu_amine_oxidase_C_sf Gene3D 210 625
IPR015802 Cu_amine_oxidase_N3 Pfam 94 197

No CAZYmes available for this sequence

No external refs found!