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  5. Sevir.8G128500.1

Sevir.8G128500.1


Description : HCP-like superfamily protein with MYND-type zinc finger


Gene families : OG_01_0017470 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0017470_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G128500.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G128500.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_30
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_416


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002893 Znf_MYND Pfam 286 325
IPR011990 TPR-like_helical_dom_sf Gene3D 55 255
IPR002893 Znf_MYND ProSiteProfiles 283 325
IPR036047 F-box-like_dom_sf SUPERFAMILY 34 85
IPR001810 F-box_dom Pfam 41 85
IPR044508 At5g50450/At1g67340-like PANTHER 7 339

No CAZYmes available for this sequence

No external refs found!