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  5. Sobic.002G293700.1

Sobic.002G293700.1


Description : trithorax-like protein 2


Gene families : OG_01_0007840 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007840_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.002G293700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.002G293700.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_19
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_146


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR032308 TDBD Pfam 215 266
IPR011011 Znf_FYVE_PHD SUPERFAMILY 1427 1487
IPR001214 SET_dom ProSiteProfiles 1760 1881
IPR013083 Znf_RING/FYVE/PHD Gene3D 1424 1497
IPR001214 SET_dom SMART 1760 1887
IPR003616 Post-SET_dom ProSiteProfiles 1889 1905
IPR001965 Znf_PHD SMART 1438 1484
IPR001965 Znf_PHD SMART 1618 1674
IPR019787 Znf_PHD-finger ProSiteProfiles 1436 1486
IPR034732 EPHD ProSiteProfiles 1542 1674
IPR019786 Zinc_finger_PHD-type_CS ProSitePatterns 1439 1483
IPR001214 SET_dom Pfam 1771 1880

No CAZYmes available for this sequence

No external refs found!